The aim of this study was mycotoxicological evaluation of spelt wheat from different organic farms located in kujawskopomorskie and warmińsko-mazurskie and their products purchased in retail trade in the city of Bydgoszcz. Material for study consisted of 53 samples: 15 – raw material (unprocessed grain) from 2009, 17 – raw material from 2010, 10 – products 2009, 11 – products 2010. The spelt products consisted of flakes, bran, flour, groat, pasta and coffee. Mycotoxins (T-2 nad HT-2, deoxynivalenol – DON, niwalenol – NIV, 3-acetyldeoxynivalenol – 3-ADON, monoacetoxyscirpenol – MAS, diacetoxyscirpenol – DAS, and zearalenone – ZEN) were determined using the HPLC-MS/MS method. During sample preparation procedures the SPE technique was used and the following internal standards were applied: 13C-DON, 13C-T-2, 13CHT- 2, ZAN. Mycotoxin analysis was performed in triplicate. Contamination of samples with studied secondary metabolites of molds was negligible. Among determined mycotoxins DON occurred at the highest concentrations. Its maximum level was determined in winter spelt grains (c = 139 ± 4 ppb), but this concentration was almost ten times lower than the maximum acceptable level of DON in non-processed cereals (Commission Regulation (EC) No. 1881/2006 of 19 December 2006). The other mycotoxins were also detected, however their average content both in raw materials and products was lower than the limit of quantification.